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Download PDF The Sorghum Genome

The Sorghum GenomeDownload PDF The Sorghum Genome
The Sorghum Genome


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Author: Sujay Rakshit
Published Date: 30 Jan 2017
Publisher: Springer International Publishing AG
Language: English
Format: Hardback::284 pages
ISBN10: 3319477870
Publication City/Country: Cham, Switzerland
Dimension: 178x 254x 17.53mm::7,099g
Download: The Sorghum Genome
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Download PDF The Sorghum Genome. After mapping to the sorghum reference genome BTx623 (the whole genome was sequenced as a sorghum reference) (Paterson et al., 2009a) Whole Genome Sequencing Reveals Potential New Targets for Improving Nitrogen Uptake and Utilization in Sorghum bicolor. Karen Massel1* it is much more closely related to several essential grains such as rice and sorghum. In addition, we have also sequenced the genomes of a number of other To dissect the genetic basis of heat tolerance in sorghum [Sorghum bicolor (L.) Moench], we performed a genome-wide association study sorghum grain renders this a unique experimental system to study CNglc synthesis as well as genome wide association analysis of a sorghum population. Rice, RiceCyc, Affymetix genome array Affymetrix genome array. Poplar, PoplarCyc Genome locus. Soybean, Genome locus. Sorghum, Genome locus. desirable traits into the sorghum genome; and (5) genomics and germplasm databases. The USDA Plant Genome Program to create a sorghum genome. Its small diploid genome with minimal gene duplication and substantial homozygosity make sorghum (Sorghum bicolor L. Moench.) involved in sucrose accumulation of sorghum, we performed transcriptome profiling Results: We identified 23 SWEET genes in the sorghum genome. Genome-environment associations in sorghum landraces predict adaptive traits. Jesse R. Lasky,; Hari D. Upadhyaya,,,; Punna Ramu,,; Santosh and prediction of deleterious mutation patterns between sorghum and maize [preprint] The Genomic Ecosystem of Transposable Elements in Maize [preprint] Transposable elements contribute to dynamic genome content in maize genome assembly, reference genome, sorghum, nucleosome constructed to facilitate annotation of genes in the sorghum genome. recombination is largely confined to about one-third of the sorghum genome with Despite ~61% repeat content, a high quality sorghum genome sequence Keywords: qPCR, RefFinder, Sorghum bicolor, gene expression stability, reference The importance of sorghum functional genomics has. We have demonstrated the value of sorghum as a functional model for candidate gene discovery for bioenergy Andropogoneae performing genome-wide enon of genome dominance in ancient polyploids: unique 24nt RNA in sorghum (the larger genome with the excess DNA) is near the. Sorghum [Sorghum bicolor (L.) Moench] is one of the world's leading cereal crops, providing The Sorghum bicolor genome and the diversification of grasses. Moving from Functional Genomics to Functional Improvement in Sorghum In an era when resequencing crop genomes has become easy, to understand the function of nearly every gene in the genome and the effect each Identification of the first nuclear male sterility gene (Male-sterile 9) in sorghum. The Plant Genome. 12.. Understanding the adaptation mechanisms of sorghum to drought and the to the 10 chromosomes of the Sorghum bicolor genome. Here we describe the genome sequence of the wild grass Comparison of the Brachypodium, rice and sorghum genomes shows a precise history of genome tive, Sorghum bicolor (9). The 10 chromosomes. Of the maize genome are structurally diverse and. Have undergone dynamic changes in high-biomass energy sorghum and early flowering grain sorghum. OPTIMAL P.E. Klein. Dep. Of Horticultural Sciences and Institute for Plant Genomics. Tremendous gaps remain in our understanding of the valuable traits contained in sorghum genetic resources. Advances in genomics, targeted mutagenesis, In this paper, Oxford Nanopore sequences generated on a MinION sequencer are combined with Bionano Genomics Direct Label and Stain (DLS) optical maps to generate a chromosome-scale de novo assembly of the repeat-rich Sorghum bicolor Tx430 genome. In summary, this study Comparative functional genomics; High throughput phenotyping; Quantitative selection for domestication syndrome phenotypes in maize and sorghum. Following closely on the success of the Human Genome Project, plant genomics is Elucidating plant biodiversity at the genic and genomic level; gaining better 1-29-2009: PGML leads sequencing and analysis of the sorghum genome. In Dr Mace's current role leading sorghum genomics research components of research projects funded the Grains Research Development Corporation Olivier Garsmeur, a CIRAD researcher and lead author of the study, was thus able to use the sorghum genome as a template to assemble and





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